Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941753.1_cds_XP_016485510.1_76428
CDS Infomation

[gene=LOC107805920] [db_xref=GeneID:107805920] [protein=FRIGIDA-like protein 3] [protein_id=XP_016485510.1] [location=complement(join(26349..26975,28734..28900,29163..30216))] [gbkey=CDS]
Sequence

ATGGCTGAGATGGATCTTCTTACGATAATCAAAAGCGTACCATTCCTGATCGAAGAATTG
GGGAAGGCATTAAAAGATCTTGAATCTCACGAAGATACCTCCATAGATAAGGGTTTACTC
GAGGATATTGAAAGACATTTCCGGGATCTGGAGGCCTCAGCAGTGAACAAGTCTTTGGAA
CTTGAAAGTAGAGAGAAAGCCTTTAAGGAACAAGAATCTGATGCACATCTGCTGATTGCT
TCACGAGAGGCAGATATAGCTGCTAGGGAGCAAAATTTGTGGGATCAGTTGCAGGAACTT
AAAGATGCTGCAGTTTCTGCAATTGCTGCAGCACGGGGAGATCATCAATTGGCATCTTTA
GAGCATACAGATGTAGAGGACAGCAAAGACATTGAGGTAAGCAGCTCTCTTGGTGGAACA
AATGAACTTCATACTGGTTCAGAGGTAAAATCCTCTGGTAGAGCTGGTGAAAATGCTGAT
GGTGTTTCTGACAAGGTCAAACCTCGACCAGAACTGACAGAATTATGTGAGAAGATGGAT
GCAGAAGGACTTCTGCATTATATTATGGAGAGTAAAAAGAATATGACCTCAATTTCTGAG
GAACTCTCCGTTGCCCTTGAAGGTGCAAGTGAACCAGGCCGTTTGGTACTGGCTTCACTT
GAGTTCTTCTACTCTAATGATGAATCTAACTCTAAAGCTGAGGAAAGCAGAAATGCTAAC
CATAGCTTGCGTCAAGCCTGCCTTGTTTGCATGGAAGCCATGGCCACCTTGTTGGCGAAA
GCTAAACCAGGTGCTGATCACCTTCTGTACCCAGAAATTAAGCAGCAAGCCAAGGTCATT
GCTGATGAATGGAAGCCTAAGTTGGCTACTGCAGGCACTGATGCTGCCAATCAAGCTCCA
TTGGAAACCGAGGCATTTTTGCAGCTCCTTGCAACTTTTAGGATTGCTTCAGAGTTTGAT
GAAGAAGAGCTCTGCAAGTTTGTTCTTGCAGTGGCTCACAATAGGCAGGGGCCTGAGCTC
TGCCGTTCTCTTGGCTTAGCAGACAAAATGCCAGGTATCATTGAAGCATTGATTCATAAT
GAGAAGCAAATTGATGCTGCTCGTTTTATTCATTCCTTCAAGCTGACTGAAAGATTTCCC
CTTGTCCCGCTCCTGAAAGGCTATTTGAGGGACTTGAGACGTAACGCACAAGGGAAGGGA
GGTAACTCGGGAAACAGGGAGGAACTTGCAGCTGTTAGGGCAGTGGTACGGTGTATTCGA
GATTACAAGCTTGAAGCAGAGTATCCACTTGATCCACTACAAAGAAGGGTTGGTCAGCTG
GAAAAAGCCATTTCTAATGACAGATCTAAGTCTAGTGATAAGAGAAGACATTCTGGATCA
GCTAGACACCAGCAATTCAAGAAACCACGACCAAGTGGAGGAACACATGGATCTACCAGA
CCTGCTAACGTTCCTAGCAGACAGCCCCCCTCTGTTTTAGTAGAAAGAGTGGCCGCTTAT
AATCCAAGCAGACCAGTCCCCTCTGGTTTAGTTGAGAGAGCAACTTATGCAGGATTGTCC
GATAAGTACACTCATCTTAGTGCATCTTATGATTATCAAGCTCCAAGTCAGGCTGCATAT
CCCCAGCAATCCTATGAGCAGAGATCATATTACTATCCAGCTGATGACGGAACTACTGCA
ACTTCTTATACACCTTCTCTGCCATATAGTTATGGCAATTACGCAGGCAGCGGAATGCCA
GTAGCAGATGAGAGAATTACTGCAAATTCTTATACAACAGATCTTCTGGCATCTAGCTAT
GGCAATTATGTGCCAACAACACATCAATCCTACGTGCCGAAGGAGTAG

Peptide Sequence

PEP ID

XP_016485510.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3 [Nicotiana tabacum]
Sequence

MAEMDLLTIIKSVPFLIEELGKALKDLESHEDTSIDKGLLEDIERHFRDLEASAVNKSLE
LESREKAFKEQESDAHLLIASREADIAAREQNLWDQLQELKDAAVSAIAAARGDHQLASL
EHTDVEDSKDIEVSSSLGGTNELHTGSEVKSSGRAGENADGVSDKVKPRPELTELCEKMD
AEGLLHYIMESKKNMTSISEELSVALEGASEPGRLVLASLEFFYSNDESNSKAEESRNAN
HSLRQACLVCMEAMATLLAKAKPGADHLLYPEIKQQAKVIADEWKPKLATAGTDAANQAP
LETEAFLQLLATFRIASEFDEEELCKFVLAVAHNRQGPELCRSLGLADKMPGIIEALIHN
EKQIDAARFIHSFKLTERFPLVPLLKGYLRDLRRNAQGKGGNSGNREELAAVRAVVRCIR
DYKLEAEYPLDPLQRRVGQLEKAISNDRSKSSDKRRHSGSARHQQFKKPRPSGGTHGSTR
PANVPSRQPPSVLVERVAAYNPSRPVPSGLVERATYAGLSDKYTHLSASYDYQAPSQAAY
PQQSYEQRSYYYPADDGTTATSYTPSLPYSYGNYAGSGMPVADERITANSYTTDLLASSY
GNYVPTTHQSYVPKE

Transcript Sequence

Gene sequence data has not been registered.